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microarray suite version 5.0 (mas5) software  (Thermo Fisher)


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    Thermo Fisher microarray suite version 5.0 (mas5) software
    Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix <t>MAS5</t> software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.
    Microarray Suite Version 5.0 (Mas5) Software, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/microarray suite version 5.0 (mas5) software/product/Thermo Fisher
    Average 90 stars, based on 1 article reviews
    microarray suite version 5.0 (mas5) software - by Bioz Stars, 2026-03
    90/100 stars

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    1) Product Images from "Primary and secondary transcriptional effects in the developing human Down syndrome brain and heart"

    Article Title: Primary and secondary transcriptional effects in the developing human Down syndrome brain and heart

    Journal: Genome Biology

    doi: 10.1186/gb-2005-6-13-r107

    Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix MAS5 software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.
    Figure Legend Snippet: Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix MAS5 software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.

    Techniques Used: Expressing, Software, Cell Culture, Derivative Assay



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    microarray suite version 5.0 (mas5) software  (Thermo Fisher)
    90
    Thermo Fisher microarray suite version 5.0 (mas5) software
    Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix <t>MAS5</t> software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.
    Microarray Suite Version 5.0 (Mas5) Software, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/microarray suite version 5.0 (mas5) software/product/Thermo Fisher
    Average 90 stars, based on 1 article reviews
    microarray suite version 5.0 (mas5) software - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier
    microarray suite version 5.0 software (mas5  (Thermo Fisher)
    90
    Thermo Fisher microarray suite version 5.0 software (mas5
    Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix <t>MAS5</t> software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.
    Microarray Suite Version 5.0 Software (Mas5, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/microarray suite version 5.0 software (mas5/product/Thermo Fisher
    Average 90 stars, based on 1 article reviews
    microarray suite version 5.0 software (mas5 - by Bioz Stars, 2026-03
    90/100 stars
    		  Buy from Supplier

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    Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix MAS5 software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.

    Journal: Genome Biology

    Article Title: Primary and secondary transcriptional effects in the developing human Down syndrome brain and heart

    doi: 10.1186/gb-2005-6-13-r107

    Figure Lengend Snippet: Increased transcript levels of genes assigned to chromosome 21 in TS21 samples compared to controls. The plots show ratio (TS21/euploid) of mean expression values, calculated using data from samples in each tissue or cell type, for all 23 chromosomes. (X and Y chromosome data were pooled.) The expression values were obtained with Affymetrix MAS5 software. The error bars represent standard errors (obtained by performing 1,000 iterations of a bootstrap resampling of the tissues). ( a ) The ratio of TS21 to euploid mean expression values for each chromosome in fetal cerebrum samples. ( b ) The ratio of TS21 to euploid mean expression values in fetal cerebellum samples. ( c ) The ratio of TS21 to euploid mean expression values in cultured astrocyte cell lines derived from fetal cerebrum tissues. ( d ) The ratio of TS21 to euploid mean expression values in fetal heart samples. ( e ) The ratio of TS21 to euploid mean expression values using data from all the above tissue and cell types.

    Article Snippet: Raw data from U133A GeneChips were processed using both Affymetrix Microarray Suite version 5.0 (MAS5) software and robust multi-chip analysis (RMA) normalization (R version 1.7.1) from BioConductor [ ].

    Techniques: Expressing, Software, Cell Culture, Derivative Assay